MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
8_33DSS_C5_S8
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 484
bases: 5,219,070 bps
CDS: 4,342
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 67
misc RNA:
Total features: 4,415
Total number of protein coding genes annotated/found:
4,342
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5047|JADGLP010000052.1
SEQF5047_00380
Genome Viewer
NA
AA
744/248
35390-36133
hypothetical protein
SEQF5047|JADGLP010000052.1
SEQF5047_00381
Genome Viewer
NA
AA
3141/1047
36201-39341
TonB-dependent receptor P3
SEQF5047|JADGLP010000052.1
SEQF5047_00382
Genome Viewer
NA
AA
1857/619
39359-41215
hypothetical protein
SEQF5047|JADGLP010000052.1
SEQF5047_00383
Genome Viewer
NA
AA
2691/897
41351-44041
TonB-dependent receptor P39
SEQF5047|JADGLP010000052.1
SEQF5047_00384
Genome Viewer
NA
AA
1674/558
44054-45727
SusD-like protein P25
SEQF5047|JADGLP010000052.1
SEQF5047_00385
Genome Viewer
NA
AA
1119/373
45750-46868
hypothetical protein
SEQF5047|JADGLP010000052.1
SEQF5047_00386
Genome Viewer
NA
AA
1254/418
46880-48133
Unsaturated glucuronyl hydrolase
SEQF5047|JADGLP010000052.1
SEQF5047_00387
Genome Viewer
NA
AA
2694/898
48146-50839
Beta-galactosidase
SEQF5047|JADGLP010000052.1
SEQF5047_00388
Genome Viewer
NA
AA
1170/390
50844-52013
Unsaturated 3S-rhamnoglycuronyl hydrolase
SEQF5047|JADGLP010000052.1
SEQF5047_00389
Genome Viewer
NA
AA
1656/552
53706-52051
Acetyl-coenzyme A synthetase
SEQF5047|JADGLP010000052.1
SEQF5047_00390
Genome Viewer
NA
AA
555/185
54268-53714
hypothetical protein
SEQF5047|JADGLP010000052.1
SEQF5047_00391
Genome Viewer
NA
AA
774/258
55107-54334
Pyrroline-5-carboxylate reductase
SEQF5047|JADGLP010000052.1
SEQF5047_00392
Genome Viewer
NA
AA
1122/374
56369-55248
[LysW]-aminoadipate semialdehyde transaminase
SEQF5047|JADGLP010000052.1
SEQF5047_00393
Genome Viewer
NA
AA
969/323
57350-56382
N-acetyl-gamma-glutamyl-phosphate reductase
SEQF5047|JADGLP010000052.1
SEQF5047_00394
Genome Viewer
NA
AA
1209/403
58555-57347
Argininosuccinate synthase
SEQF5047|JADGLP010000052.1
SEQF5047_00395
Genome Viewer
NA
AA
579/193
59151-58573
hypothetical protein
SEQF5047|JADGLP010000052.1
SEQF5047_00396
Genome Viewer
NA
AA
501/167
59678-59178
Arginine repressor
SEQF5047|JADGLP010000052.1
SEQF5047_00397
Genome Viewer
NA
AA
921/307
60733-59813
hypothetical protein
SEQF5047|JADGLP010000052.1
SEQF5047_00398
Genome Viewer
NA
AA
129/43
60983-60855
hypothetical protein
SEQF5047|JADGLP010000052.1
SEQF5047_00399
Genome Viewer
NA
AA
1998/666
63065-61068
hypothetical protein
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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